This page includes implementations and links related to our project entitled “Shape-preserving deep neural networks for instance segmentation in medical images”. This project has been supported by the Scientific and Technological Research Council of Turkey (TUBITAK), under the project no: TUBITAK 120E497.

Codes
Persistent homology calculations
FourierNet implementation

Preprints
S. Cansiz, C. Kesim, S.N. Bektas, Z. Kulali, M. Hasanreisoglu, and C. Gunduz-Demir, “FourierNet: Shape-preserving network for Henle’s fiber layer segmentation in optical coherence tomography images,” https://arxiv.org/abs/2201.06435.